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The name file is used to show the relationship between a representative sequence and the sequences it represents. It consists of 2 columns separated by a tab. The first column contains the representative sequence's name. The second column contains the names of its representatives separated by commas. Here is an example:
65_6_19 65_6_19 65_10_4 65_10_4 65_10_10 65_10_10,65_10_8,65_4_21,65_6_16,65_7_17,65_7_6,65_9_14 65_5_11 65_5_11 65_8_3 65_8_3 65_1_2 65_1_2,65_1_23,65_2_1,65_2_8 65_3_5 65_3_5 65_2_21 65_2_21,65_3_12,65_3_3,65_3_6 ...
- Be sure not to include the ">" in the name of the sequence.
- Your sequence name cannot contain blank spaces.