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Difference between revisions of "Mothur v.1.9.0"

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(Options)
(Bug fixes)
Line 6: Line 6:
 
* Problem with "../" ==> align.seqs(candidate=wobus.unique.fasta, template=../DataAnalysis/silva.refalign.fasta, processors=2); Segmentation fault
 
* Problem with "../" ==> align.seqs(candidate=wobus.unique.fasta, template=../DataAnalysis/silva.refalign.fasta, processors=2); Segmentation fault
 
* fixed bug in merge.files that inserted the eof character in between the merged files
 
* fixed bug in merge.files that inserted the eof character in between the merged files
 +
* fixed bug that could cause a badalloc to occur while reading a sabund file

Revision as of 15:57, 22 February 2010

Options

  • added output parameter to otu.hierarchy command, options are name and number. name is default. you can output either the names of the sequences in the OTUs or the OTU numbers.
  • added dups parameter to remove.seqs command.

Bug fixes

  • Problem with "../" ==> align.seqs(candidate=wobus.unique.fasta, template=../DataAnalysis/silva.refalign.fasta, processors=2); Segmentation fault
  • fixed bug in merge.files that inserted the eof character in between the merged files
  • fixed bug that could cause a badalloc to occur while reading a sabund file