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Difference between revisions of "Mothur v.1.2.0"

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(Major Feature Additions)
(Major Feature Additions)
Line 8: Line 8:
 
*modified read.dist to read matrix for libshuff command.
 
*modified read.dist to read matrix for libshuff command.
 
*heatmap command
 
*heatmap command
 +
*venn command
 
*bin.seqs command
 
*bin.seqs command
 
*get.oturep command
 
*get.oturep command

Revision as of 17:48, 6 April 2009

Cosmetic Changes

Major Feature Additions

  • libshuff command.
  • modified read.dist to read matrix for libshuff command.
  • heatmap command
  • venn command
  • bin.seqs command
  • get.oturep command

Minor Feature Additions

  • Added the following calculators:
  • logsd (Lognormal distribution)
  • geom (Geometric Series)
  • qstat (Q Statistic)
  • bergerparker (Berger-Parker index)
  • nseqs
  • sharedkstest (Kolmogorov-Smirnov 2-sample Test)
  • sharedbdiversity (Whittaker, Sorensen, and Morisita-Horn indices for beta diversity; Marczewski-Steinhaus distance)
  • sharednseqs
  • sharedanderbergs
  • sharedbraycurtis
  • sharedkulczynski
  • sharedkulczynskicody
  • sharedlennon
  • sharedmoristahorn
  • sharedochiai