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Difference between revisions of "Mothur v.1.10.0"

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(Feature updates)
(Feature updates)
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==Feature updates==
 
==Feature updates==
 
* http://www.mothur.org/forum/viewtopic.php?f=5&t=300&p=749&sid=80af1914178877c36516229d2fe8d809#p749 - added group parameter to [[classify.seqs]], reworked summary file so the taxids are based on the reference taxonomy.
 
* http://www.mothur.org/forum/viewtopic.php?f=5&t=300&p=749&sid=80af1914178877c36516229d2fe8d809#p749 - added group parameter to [[classify.seqs]], reworked summary file so the taxids are based on the reference taxonomy.
 +
* made taxonomy static between runs
 
* speed comparison between our classify.seqs with bayesian and the RDPs.  Have received reports that ours is much slower.
 
* speed comparison between our classify.seqs with bayesian and the RDPs.  Have received reports that ours is much slower.
 
* added name option for [[phylotype]] command
 
* added name option for [[phylotype]] command

Revision as of 14:13, 30 April 2010

These will be available in the next version of mothur. Stay tuned for a release in May 2010.


New commands

  • added set.logfile command - allows user to set logfile name and/or append the log to an existing file

Feature updates

Bug fixes

  • fixed bug with MPI Enabled version that would cause a malloc error if the number of seqs in your input file did not divide evenly between processes.