sequences not in group file but in fasta

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kmitchell
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sequences not in group file but in fasta

Post by kmitchell » Fri Jun 29, 2018 1:07 pm

I'm getting an error I've never seen before. make.contigs seems to work, but some sequences aren't getting into the groups file? For one dataset I saw this with 1.39.5, switched to 1.40.5 and it went away. Second dataset, still seeing it in 1.40.5. I'll send logfiles to mothur bugs

thanks Kendra

pschloss
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Re: sequences not in group file but in fasta

Post by pschloss » Mon Jul 09, 2018 12:54 pm

Can you tell us how you're running make.contigs and what OS you're using?


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